Publications

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M
Mazur AK.  1999.  Internal correlations in minor groove profiles of experimental and computed B-DNA conformations. J. Mol. Biol.. 290:373–377.
Mazur AK.  2001.  Internal coordinate simulation method. Computational Biochemistry and Biophysics. :115–131.
Mazur AK.  2008.  The electrostatic origin of low-hydration polymorphism in DNA. Chemphyschem in Press. 9:2691–2694.
Mazur AK, Petukhov M.G, Elyakova L.A.  1988.  Model of spatial random movement of depolymerase when interacting with the substrate. Biophysics. 23:417–421.
Mazur AK, Haser R., Payan F..  1994.  The catalytic mechanism of {$\alpha$}-amylases based upon enzyme crystal structures and model building calculations. Biochem. Biophys. Res. Commun.. 204:297–302.
Mazur AK.  1990.  A new method for analysing of kinetic graphs in enzymatic catalysis. Mol. Biol.. 24:209–213.
Mazur AK, Abagyan R.A, Elyakov G.B.  1989.  A new approach to the modelling of the structure and dynamics of biomacromolecules and their complexes. Doklady. Biophysics. 304:456–460.
Mazur AK.  2009.  Analysis of accordion DNA stretching revealed by the gold cluster ruler. Phys. Rev. E. 80:010901.
Mazur AK.  2002.  DNA dynamics in a water drop without counterions. J. Am. Chem. Soc.. 124:14707–14715.
Mazur AK.  2013.  Comment on ``Length Scale Dependence of DNA Mechanical Properties''. Phys. Rev. Lett.. 111
Mazur AK.  2017.  Weak nanoscale chaos and anomalous relaxation in DNA. Phys. Rev. E. 95:062417.
Mazur AK.  2013.  Comment on ’Length scale dependence of DNA mechanical properties’. Phys. Rev. Lett.. 111:179801.
Mazur AK, Maaloum M.  2014.  DNA flexibility on short length scales probed by atomic force microscopy. Phys. Rev. Lett.. 112:068104.
Mazur AK.  2009.  Modeling DNA dynamics under steady deforming forces and torques. J. Chem. Theory Comput.. 5:2149–2157.
Mazur AK.  1998.  Hierarchy of fast motions in protein dynamics. J. Phys. Chem. B. 102:473–479.
Mazur AK, Kamashev DE.  2002.  Comparative bending dynamics in DNA with and without regularly repeated adenine tracts. Phys. Rev. E. 66:011917.
Mazur AK.  2000.  Theoretical studies of the possible origin of intrinsic static bends in double helical DNA. J. Am. Chem. Soc.. 122:12778–12785.
Mazur AK.  1999.  Symplectic integration of closed chain rigid body dynamics with internal coordinate equations of motion. J. Chem. Phys.. 111:1407–1414.
Mazur AK.  1984.  Most probable distribution at enzyme depolymerization of polysaccharides. Biopolymers. 23:859–876.
Mazur AK, Elyakova L.A.  1983.  Kinetics of glucose accumulation during depolimerization of polysaccharides by enzymes with different mechanisms of action. Mol. Biol.. 17:101–111.
Mazur AK.  1997.  Common molecular dynamics algorithms revisited: Accuracy and optimal time steps of St\H ormer-leapfrog integrators. J. Comput. Phys.. 136:354–365.
Mazur AK.  2009.  Kinetic and thermodynamic DNA elasticity at micro- and mesoscopic scales. J. Phys. Chem. B. 113:2077–2089.
Mazur AK.  2016.  Homologous Pairing between Long DNA Double Helices. Phys. Rev. Lett.. 116:158101.
Mazur AK.  2006.  Evaluation of elastic properties of atomistic DNA models. Biophys. J.. 91:4507–4518.
Mazur AK.  2010.  Anharmonic torsional stiffness of DNA revealed under small external torques. Phys. Rev. Lett.. 105:018102.

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