Publications
Export 55 results:
Author Title [ Type
] Year Filters: Author is Sophie Sacquin-Mora [Clear All Filters]
.
2025. Impact of multiple phosphorylations on the tau-R2/tubulin interface. Biochemistry.
.
2020. Implicit Modeling of the Impact of Adsorption on Solid Surfaces for Protein Mechanics and Activity with a Coarse-Grained Representation. J Phys Chem B. 124:8516–8523.
.
2006. Investigating the local flexibility of functional residues in hemoproteins. Biophys. J.. 90:2706–2717.
.
2015. Investigating the Structural Variability and Binding Modes of the Glioma Targeting NFL-TBS.40-63 Peptide on Tubulin. Biochemistry. 54:3660–3669.
.
2023. It Takes Tau to Tango: Investigating the Fuzzy Interaction between the R2-Repeat Domain and Tubulin C-Terminal Tails. Biochemistry. 62:2492–2502.
.
2009. Joint Evolutionary Trees: A Large-Scale Method To Predict Protein Interfaces Based on Sequence Sampling. Plos Comput. Biol.. 5:e1000267.
.
2007. Locating the active sites of enzymes using mechanical properties. Proteins: Struct., Funct., Bioinf.. 67:350–359.
.
2009. Modeling the Mechanical Response of Proteins to Anisotropic Deformation. Chemphyschem. 10:115–118.
.
2018. Mechanical variations in proteins with large-scale motions highlight the formation of structural locks. Journal of Structural Biology.
.
2018. Meet-U: Educating through research immersion. PLOS Computational Biology. 14:1-10.
.
2017. Mobility and core-protein binding patterns of disordered C-terminal tails in β-tubulin isotypes.. Biochemistry. 56(12):1746–1756.
.
2022. Modeling the Dynamics of Protein-Protein Interfaces, How and Why? Molecules. 27:1841.
.
2014. Motions and mechanics: investigating conformational transitions in multi-domain proteins with coarse-grain simulations. Mol. Simul.. 40:229–236.
.
2021. Moving pictures: Reassessing docking experiments with a dynamic view of protein interfaces.. Proteins.
.
2014. Multiscale Simulations Give Insight into the Hydrogen In and Out Pathways of [NiFe]-Hydrogenases from Aquifex aeolicus and Desulfovibrio fructosovorans. J. Phys. Chem. B. 118:13800–13811.
.
2003. Nanoscopic liquid bridges exposed to a torsional strain. Physical Review E. 68:066103.
.
2024. NP-collabs: Investigating counterion-mediated bridges in the multiply phosphorylated tau-R2 repeat. J. Chem. Inf. Model.. 64:6570–6582.
.
2024. A Perspective on the Prospective Use of AI in Protein Structure Prediction. J Chem Inf Model. 64:26–41.
.
2007. Probing the flexibility of the bacterial reaction center: The wild-type protein is more rigid than two site-specific mutants. Biochemistry. 46:14960–14968.
.
2020. Protein Interaction Energy Landscapes are Shaped by Functional and also Non-functional Partners.. J Mol Biol. 432(4):1183-1198.
.
2007. Protein mechanics: a route from structure to function. Journal of Biosciences. 32:891–898.
.
2013. Protein-protein interactions in a crowded environment: an analysis via cross-docking simulations and evolutionary information. Plos Comput. Biol.. 9:e1003369.
.
2009. Relating the Diffusion of Small Ligands in Human Neuroglobin to Its Structural and Mechanical Properties. J. Phys. Chem. B. 113:16257–16267.
.
2024. Structural profiles of the full phagocyte NADPH oxidase unveiled by combining computational biology and experimental knowledge. J. Biol. Chem.. 300:107943.
.
2014. The weak, fluctuating, dipole moment of membrane-bound hydrogenase from Aquifex aeolicus accounts for its adaptability to charged electrodes. Phys. Chem. Chem. Phys.. 16:11318–11322.